I am a Full Professor at the Mathematics and Applications Department of the University of Minho (Portugal), member of the
ATP-group and of the Centre of Molecular and Environmental Biology.

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Selected Publications

The ecology of cancer

C. 177. The ecology of cancer from an evolutionary game theory perspective
Jorge M. Pacheco, Francisco C. Santos, David Dingli
Interface focus 4, 4 (2014) 20140019

C. 113. Tyrosine kinase inhibitor therapy can cure chronic myeloid leukemia without hitting leukemic stem cells
Tom Lenaerts, Jorge M. Pacheco, Arne Traulsen, David Dingli
Haematologica 95 (2010) 900-907

C. 103. Neutral evolution in paroxysmal nocturnal hemoglobinuria
David Dingli, Lucio Luzzatto, Jorge M. Pacheco
Proceedings of the National Academy of Sciences (USA) 105 (2008) 18496

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Evolution of Moral & Reputations via Indirect Reciprocity

A. 202. Social norm complexity and past reputations in the evolution of cooperation
Fernando P. Santos, Francisco C. Santos, Jorge M. Pacheco
Nature 555 (2018) 242-245
Supplementary Information / blog@Nature

A. 186. Social Norms of Cooperation in Small-Scale Societies
Fernando P. Santos, Francisco C. Santos, Jorge M. Pacheco
PLoS-Computational Biology 12 (2016) e1004709378

A. 069. Stern-judging : A simple, successful norm which promotes cooperation under indirect reciprocity
Jorge M. Pacheco, F. C. Santos, Fabio A. C. C. Chalub
PLoS Computational Biology 2(12) (2006) e178

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Networks & the Evolution of Cooperation

A. 098. Social diversity promotes the emergence of cooperation in public goods games
Francisco C. Santos, Marta D. Santos, Jorge M. Pacheco
Nature 454 (2008) 213-216

A. 067. Cooperation Prevails when individuals adjust their social ties (open access)
F. C. Santos, Jorge M. Pacheco, Tom Lenaerts
PLoS Computational Biology 2(10) (2006) 1284

A. 055. Scale-Free networks provide a unifying framework for the Emergence of Cooperation
Francisco C. Santos, Jorge M. Pacheco
Physical Review Letters 95 (2005) 098104

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Evolution of Signaling & Cooperation

A. 179. Co-evolutionary Dynamics of Collective Action with Signaling for a Quorum
Jorge M. Pacheco, Vítor V. Vasconcelos, Francisco C. Santos, Brian Skyrms
PLoS Computational Biology 11 (2) (2015) e1004101

A. 136. Co-evolution of pre-play signaling and cooperation
Francisco C Santos, Jorge M Pacheco, Brian Skyrms
Journal of Theoretical Biology 274 (2011) 30-35

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Climate Change Governance

A. 174. Climate Policies under Wealth Inequality
Vítor V. Vasconcelos, Francisco C. Santos, Jorge M. Pacheco, Simon A. Levin
Proceedings of the National Academy of Sciences (USA) 111 (6) (2014) 2212-2216

A. 169. A bottom-up institutional approach to cooperative governance of risky commons
Vítor V. Vasconcelos, Francisco C. Santos, Jorge M. Pacheco
Nature Climate Change 3 (2013) 797–801

A. 140. Risk of collective failure provides an escape from the tragedy of the commons
Francisco C. Santos and Jorge M. Pacheco
Proceedings of the National Academy of Sciences (USA) 108 (2011) 10421-10425.

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New methods for dealing with population dynamics

A. 191. Stochastic dynamics through hierarchically embedded Markov chains
Vítor V. Vasconcelos, Fernando P. Santos, Francisco C. Santos, Jorge M. Pacheco
Physical Review Letters 118 (2017) 058301

A. 187. Linking Individual and Collective Behavior in Adaptive Social Networks
Flávio L. Pinheiro, Francisco C. Santos, Jorge M. Pacheco
Physical Review Letters 116 (2016) 128702

A. 061. Stochastic dynamics of invasion and fixation
Arne Traulsen, Martin A. Nowak, Jorge M. Pacheco
Physical Review E 74 (2006) 011909

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Environmental & Early Modern History

D. 192. Environmental Impacts of Colonial Dynamics in the First Global Age and the Anthropocene
Amélia Polónia, Jorge M. Pacheco
in Economic Development and Environmental History in the Anthropocene (Bloomsbury 2017)

D. XXX. Structural patterns of the first global trading market
Ana Sofia Ribeiro, Flávio L. Pinheiro, Francisco C. Santos, Amélia Polónia, Jorge M. Pacheco
(under review)

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Dynamical processes on (adaptive) Networks

C. 201. Disease spreading in time-evolving networked communities
Jorge M. Pacheco, Sven van Segbroeck, Francisco C. Santos
in Temporal Network Epidemiology (N. Masuda and P. Holme, Edts), Ch. 13 pp 291-316, Springer Nature (2017)

A. 200. Structural power and the evolution of collective fairness in social networks
Fernando P. Santos, Jorge M. Pacheco, Ana Paiva, Francisco C. Santos
PLoS-ONE 12(4) (2017) e0175687

A & D. 176. Origin of Peer Influence in Social Networks
Flávio L. Pinheiro, Marta D. Santos, Francisco C. Santos, Jorge M. Pacheco
Physical Review Letters 112, 9 (2014) 098702

D. 127. Adaptive contact networks change disease infectiousness and dynamics
Sven Van Segbroeck, Francisco C. Santos, Jorge M. Pacheco
PLoS Computational Biology 6(8)(2010) e1000895

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Quantitative Policy & Political Science

A. 190. Paradigm shifts and the interplay between state, business and civil sectors
Sara Encarnação, Fernando P. Santos, Francisco C. Santos, Vered Blass, Jorge M. Pacheco, Juval Portugali
Royal Society Open Science 3 (2016) 160753

A. 185. Evolutionary dynamics of collective index insurance
Jorge M. Pacheco, Francisco C. Santos, Simon A. Levin
Journal of Mathematical Biology 72 (2016) 997-1010

A. 188. An evolutionary game theoretic approach to multi-sector coordination and self-organization
Fernando P. Santos, Sara Encarnação, Francisco C. Santos, Juval Portugali, Jorge M. Pacheco
Entropy 18,2 (2016) 152

D. 163. Fractal cartography of urban areas
Sara Encarnação, Marcos Gaudiano, Francisco C. Santos, José A. Tenedório, Jorge M. Pacheco
Nature Scientific Reports 2 (2012) 527

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Complex Systems

I carry out research in several topics of so-called complex systems . . .

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Quantum Systems

I also study quantum many-body systems. . .

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